update cf generation script to not crash docker deployment

aws/cloudformation/cf_template.template

@@ -90,7 +90,7 @@
                 "sudo systemctl enable docker\n",
                 "sudo systemctl start docker\n",
                 "sudo yum install git -y\n",
-                "git clone -b cloud-deploy https://github.com/Mintplex-Labs/anything-llm.git /home/ec2-user/anything-llm\n",
+                "git clone https://github.com/Mintplex-Labs/anything-llm.git /home/ec2-user/anything-llm\n",
                 "cd /home/ec2-user/anything-llm/docker\n",
                 "cat >> .env << \"END\"\n",
                 "!SUB::USER::CONTENT!",

aws/cloudformation/generate.mjs

@@ -37,7 +37,7 @@ const settings = fs.readFileSync(envPath, "utf8")
   .replace(/^\s*\n/gm, "")
   .split('\n')
   .filter((i) => !!i)
-
+  .map((i) => i + '\n')
 
 const templatePath = path.resolve(__dirname, `cf_template.template`);
 const templateString = fs.readFileSync(templatePath, "utf8");